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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930779.1_cds_XP_016477758.1_69455
CDS Infomation

[gene=LOC107799186] [db_xref=GeneID:107799186] [protein=L-arabinokinase-like] [protein_id=XP_016477758.1] [location=complement(join(2239..2398,2478..2608,2987..3112,3766..3849,5363..5531,5628..5800,5934..6110,6216..6325,6407..6509,6581..6634,7659..7721,7816..7883,7970..8027,8245..8311,9125..9201,9678..9761,9896..9964,10063..10170,11036..11125))] [gbkey=CDS]
Sequence

ATGGGCACTGAGGAGTCCAAGAAACGCCCTCTTGTCTTTGCTTACTATGTTACCGGTCAT
GGCTTTGGCCATGCCACTCGAGTTGTTGAGGTCGCTAGAAATCTCATCCTAGCTGGGCAT
GATGTTCATGTCGTCACGGGTGCACCTGACTTTGTCTTTACATCTGAAATACAATCTCCT
CGGCTTTTCCTGCGCAAGGTATTGTTGGATTGTGGAGCAGTTCAAGCTGATGCTTTGACA
GTGGACCGTCTTGCCTCACTAGAGAAGTATTCTGAGACCGCTGTTGTACCACGTGCATCC
ATCTTGGCAACGGAAGTGCTGTGGCTCAAATCCATCAAGGCAGATTTTGTGGTATCAGAT
GTTGTTCCAGTTGCTTGCAGGGCAGCAGCTGATGCTGGAATTCCATCTGTTTGTATCACC
AACTTCAGCTGGGACTTCATCTACGCAGAGTATGTAATGGCAGCTGGAAATCATCATAGG
TCAATAGTGTGGCAGATTGCAGAGGACTATTCCCATTGTGAATTTCTTATTCGGCTGCCA
GGATATTGTCCAATGCCTGCTTTTCGTGATATAATTGACGTGCCGTTGGTTGTAAGGAGA
TTGCACAAATATCGCAAAGAGGTGCGGAAAGAACTTGGAATTGGGGAGGATGTGAAAGTT
GTTATTCTGAACTTTGGTGGACAGCCCGCAGGTTGGAAGTTGAAGGAGGAGTACTTACCA
ACTGGATGGTTATGCCTGGTTTGTGGTGCCTCTGAGAGCCAGCAACTACCTCCAAATTTC
ATAAAGCTTGCAAAAAATGCATATACTCCGGATATAATGGCCGCATCAGACTGCATGCTA
GGAAAAATTGGATATGGTACCGTTAGCGAGGCCCTGGCTTACAGGTTACCATTTGTATTT
GTTCGTAGAGACTACTTTAATGAAGAACCATTTCTCAGAAATATGCTTGAGTATTATCAA
GGTGGTGTTGAGATGATCAGAAGGGATTTACTTACTGGACATTGGAGACCTTACCTTGAA
CGTGCAATGACTCTGAACCCATGTTACGAAGGTGGAACTAATGGTGGTGAAGTTGCAGCT
CGTATTTTACAGGATACAGCTTATGGTAAAAACTATACATTAGACAAGCTGAGTGGGCCA
AGAAGACTGCGTGATGCCATAGTTCTTGGATATCAATTGCAAAGAGTTCCCGGTAGAGAT
CTCTGTATTCCAGATTGGTATGCAAATGCCGAAAGTGAACTTGGTCTTCGCACAGGATCA
CCTACTGCTGTAACAGCTGAAAATAACTCTCTAACAGACTCATATCCTCAGGACTTTGAA
ATTCTCCATGGAGATTTTCTTGGTCTGTCAGATACGCTAAGTTTCTTGAAGAGCTTGGCA
GGATTGGATGCTTTGGTTGATTCCCCAACTAAAACAGGAAAGCACAGCATTAGGGAGCGG
AAAGCTGCCGCTGGTCTTTTCAATTGGGAGGAAGACATTTTTGTGGCAAGAGCACCTGGA
AGGCTAGATGTGATGGGTGGAATTGCTGACTACTCTGGAAGCCTTGTTTTACAGATGCCA
ATTAGAGAAGCCTGCCATGTTGCTGTTCAAAAGATTCACCCTAGCAAACAGAGGCTGTGG
AAGCATGCTTTGGCTCGGCAGCAGGCCAGAGGACAAGGCCCTACCCCTGTGCTTCAAATT
GTGTCATATGGGTCAGAACTGAGCAACCGTGGTCCAACGTTTGACATGGACTTATCAGAT
TTCTTGGAAGGGGATGAACCCATAACTTATGAGAAAGCGAGGCAGTATTTTGCCCGAGAT
CCTTCCCAAAGATGGGCTGCATATGTTGCTGGCACAGTTCTAGTTTTGATGAAGGAACTT
GGCATATGCTTTGAGAATAGTATTAGTTTGCTGGTCAGTCCAACTCCATTACCCATTGCC
TTGTCGTCTCCTAGCTGGAAATTGTTTGCTTTCCATCTATTACTTGAATAA

Peptide Sequence

PEP ID

XP_016477758.1
PEP Infomation

PREDICTED: L-arabinokinase-like [Nicotiana tabacum]
Sequence

MGTEESKKRPLVFAYYVTGHGFGHATRVVEVARNLILAGHDVHVVTGAPDFVFTSEIQSP
RLFLRKVLLDCGAVQADALTVDRLASLEKYSETAVVPRASILATEVLWLKSIKADFVVSD
VVPVACRAAADAGIPSVCITNFSWDFIYAEYVMAAGNHHRSIVWQIAEDYSHCEFLIRLP
GYCPMPAFRDIIDVPLVVRRLHKYRKEVRKELGIGEDVKVVILNFGGQPAGWKLKEEYLP
TGWLCLVCGASESQQLPPNFIKLAKNAYTPDIMAASDCMLGKIGYGTVSEALAYRLPFVF
VRRDYFNEEPFLRNMLEYYQGGVEMIRRDLLTGHWRPYLERAMTLNPCYEGGTNGGEVAA
RILQDTAYGKNYTLDKLSGPRRLRDAIVLGYQLQRVPGRDLCIPDWYANAESELGLRTGS
PTAVTAENNSLTDSYPQDFEILHGDFLGLSDTLSFLKSLAGLDALVDSPTKTGKHSIRER
KAAAGLFNWEEDIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVAVQKIHPSKQRLW
KHALARQQARGQGPTPVLQIVSYGSELSNRGPTFDMDLSDFLEGDEPITYEKARQYFARD
PSQRWAAYVAGTVLVLMKELGICFENSISLLVSPTPLPIALSSPSWKLFAFHLLLE

Transcript Sequence

Gene sequence data has not been registered.